Package: fcfdr 1.0.0

fcfdr: Flexible cFDR

Provides functions to implement the Flexible cFDR (Hutchinson et al. (2021) <doi:10.1371/journal.pgen.1009853>) and Binary cFDR (Hutchinson et al. (2021) <doi:10.1101/2021.10.21.465274>) methodologies to leverage auxiliary data from arbitrary distributions, for example functional genomic data, with GWAS p-values to generate re-weighted p-values.

Authors:Anna Hutchinson [aut, cre], Chris Wallace [aut], Thomas Willis [ctb, aut], James Liley [ctb]

fcfdr_1.0.0.tar.gz
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fcfdr_1.0.0.tgz(r-4.4-any)fcfdr_1.0.0.tgz(r-4.3-any)
fcfdr_1.0.0.tar.gz(r-4.5-noble)fcfdr_1.0.0.tar.gz(r-4.4-noble)
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fcfdr.pdf |fcfdr.html✨
fcfdr/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/annahutch/fcfdr/issues

On CRAN:

7 exports 6 stars 1.33 score 86 dependencies 9 scripts 247 downloads

Last updated 3 years agofrom:c2e73698a1. Checks:OK: 7. Indexed: yes.

Exports:binary_cfdrcorr_plotflexible_cfdrlog10pv_plotparameters_in_locfdrpv_plotstratified_qqplot

Dependencies:backportsbase64encbigsplinesbslibcachemcheckmatecliclustercolorspacecowplotdata.tabledeldirdigestdotCall64dplyrevaluatefansifarverfastmapfieldsfontawesomeforeignFormulafsgenericsggplot2gluegridExtragtablehexbinhighrHmischtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonliteknitrlabelinglatticelifecyclelocfdrmagrittrmapsMASSMatrixmemoisemgcvmimemunsellnlmennetpillarpkgconfigpolyclippolyCubquadprogR6rappdirsRColorBrewerRcpprlangrmarkdownrpartrstudioapisassscalesspspamspatstat.dataspatstat.geomspatstat.univarspatstat.utilsstringistringrtibbletidyselecttinytexutf8vctrsviridisviridisLitewithrxfunyaml